Pedigree-drawing with R and graphviz
Bioinformatics Advance Access originally published online on February 17, 2006
Bioinformatics 2006 22(8):1013-1014; doi:10.1093/bioinformatics/btl058
Jing Hua Zhao
MRC Epidemiology Unit, Strangeways Research Laboratory Cambridge CB1 8RN, UK
Summary: Two functions for pedigree-drawing available in R (http://www.r-project.org): plot.pedigree in kinship and pedtodot in gap are described. The latter requires graphviz (http://www.graphviz.org). They can produce many pedigree diagrams quickly into a single file, serving as alternatives to programs that only offer interactive use.
Availability: Packages kinship and gap are available from http://cran.r-project.org.
Contact: jinghua.zhao@mrc-epid.cam.ac.uk
posted by Tian Zheng @ 9:28 AM
10 comments
10 Comments:
Hi,
I cannot help myself to show you old pedigrees (of dogs) as they were made during the 20th century:
http://www.braquedubourbonnais.info/en/pedigree.htm
Thank.. you very much for the article. it is excellent..
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It great that know it is possible to produce many pedigree diagrams quickly into a single file.
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I love all this pedigree - relationship graphics stuff!
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I can't believe that now it is possible to create many pedigree diagrams into single file.
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