Thursday, April 13, 2006

Pedigree-drawing with R and graphviz

Bioinformatics Advance Access originally published online on February 17, 2006
Bioinformatics 2006 22(8):1013-1014; doi:10.1093/bioinformatics/btl058

Jing Hua Zhao

MRC Epidemiology Unit, Strangeways Research Laboratory Cambridge CB1 8RN, UK

Summary: Two functions for pedigree-drawing available in R (http://www.r-project.org): plot.pedigree in kinship and pedtodot in gap are described. The latter requires graphviz (http://www.graphviz.org). They can produce many pedigree diagrams quickly into a single file, serving as alternatives to programs that only offer interactive use.

Availability: Packages kinship and gap are available from http://cran.r-project.org.

Contact: jinghua.zhao@mrc-epid.cam.ac.uk

3 Comments:

At 10:33 AM, Blogger mic_comte said...

Hi,
I cannot help myself to show you old pedigrees (of dogs) as they were made during the 20th century:
http://www.braquedubourbonnais.info/en/pedigree.htm

 
At 5:05 AM, Blogger Mr.Jongruk said...

Thank.. you very much for the article. it is excellent..

 
At 4:56 PM, Blogger Robert McNiel said...

Nice research you've done here. Certainly impressive work about the subject. acai

 

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